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Publications in 2006

Publications in 2006

Thomas Hinze, Thorsten Lenser, Peter Dittrich (2006)
A Protein Substructure Based P System for Description and Analysis of Cell Signalling Networks
In: H.J. Hoogeboom, G. Paun, G. Rozenberg (Eds.), Proceedings Seventh Workshop on Membrane Computing (WMC7), Leiden, Series Lecture Notes in Computer Science, Vol. 4361, pp. 409-423, Springer Verlag, 2006

James Decraene, Peter Dittrich, Thomas Hinze, Thorsten Lenser (2006)
A Protein Substructure Based P System for Description and Analysis of Cell Signalling Networks
In: H.J. Hoogeboom, G. Paun, G. Rozenberg (Eds.), Proceedings Seventh Workshop on Membrane Computing (WMC7), Leiden, Series Lecture Notes in Computer Science, Vol. 4361, pp. 409-423, Springer Verlag, 2006

Thomas Hinze, Thorsten Lenser, Peter Dittrich (2006)
Zellsignalnetzwerke - Biologische Computer mit universeller Berechnungsstärke
In: R. Freund, M. Oswald (Eds.), Proc. 16. Theorietag Automaten und Formale Sprachen, p. 73--77, TU Wien, 2006

Christoph Schmidt, Thomas Hinze, Thorsten Lenser, Peter Dittrich (2006)
Selected Public Databases and Software Tools with Relevance to the ESIGNET Project
Technical Report on Computer Science 06-24, 64 pp., FSU Jena, 2006

Naoki Matsumaru, Peter Dittrich (2006)
Organization-oriented chemical programming for the organic design of distributed computing systems
Proc. of BIONETICS'06, Cavalese, December 11-13, IEEE
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Anne Kupczok, Peter Dittrich (2006)
Determinants of Simulated RNA Evolution
J. Theor. Biol., 238(3), 726-735
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Christoph Kaleta, Florian Centler, Peter Dittrich (2006)
Analyzing Molecular Reaction Networks: From Pathways to Chemical Organizations
Mol. Biotechnol., 34(2): 117-123

Naoki Matsumaru, Pietro Speroni di Fenizio, Florian Centler, Peter Dittrich (2006)
On the Evolution of Chemical Organizations
in: S. Artmann, P. Dittrich (Eds.), Proc. 7th German Workshop on Artificial Life, p. 135-146
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Stefan Artman, Peter Dittrich (2006)
Explorations in the Complexity of Possible Life: Abstracting and Synthesizing the Principles of Living Systems, Proceedings of the 7th German Workshop on Artificial Life
IOS Press, Amsterdam

Naoki Matsumaru, Florian Centler, Pietro Speroni di Fenizio, Peter Dittrich (2006)
Chemical organization theory applied to virus dynamics
it - Information Technology, 48(3), 154-160
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Peter Dittrich, Pietro Speroni di Fenizio (2006)
Chemical Organization Theory
In: M. Al-Rubeai, M. Fussenegger (Eds.); Cell Engineering, Volume 5: Systems Biology, p. 361-393, Springer
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Naoki Matsumaru, Florian Centler, Pietro Speroni di Fenizio, Peter Dittrich (2006)
Chemical Organization Theory as a Theoretical Base for Chemical Computing
International Journal of Unconventional Computing, 3(4), 285-309
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Florian Centler, Pietro Speroni di Fenizio, Naoki Matsumaru, Peter Dittrich (2006)
Chemical organizations in the central sugar metabolism of Escherichia Coli
In: Modeling and Simulation in Science Engineering and Technology, Post-proceedings of ECMTB 2005 (in print)

Christian Knüpfer, Clemens Beckstein, Peter Dittrich (2006)
Towards a Semantic Description of Bio-Models: Meaning Facets -- A Case Study
In Ananiadou, S., Fluck, J. (eds.): Proceedings of the Second International Symposium on Semantic Mining in Biomedicine (SMBM 2006), Jena, April 9-12, 2006. CEUR-WS, Aachen, RWTH University, pp.97-100 (2006)
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Clemens Beckstein, Peter Dittrich, Christian Erfurth, Dietmar Fey, Birgitta König-Ries, Martin Mundhenk, Harald Sack (2006)
SOGOS - Distributed Meta Level Architecture for the Self-Organizing Grid of Services
In: Mobile Services and Ontologies (MoSO 2006), 9 May 2006, Nara, Japan, p. 1-8, IEEE DL (in print)